create_fasta

Convert IgLabel-style labels in a FASTA file to dummy IUIS format

usage: create_fasta [-h] [-g] [-f FIELDS] [-n] germline_set output_file

Positional Arguments

germline_set

Germline set in AIRR-C format

output_file

Germline set in FASTA format

Named Arguments

-g, --gapped_set

Create IMGT-gapped set

Default: False

-f, --fields

add comma-separated fields to headers, e.g. release_version,aliases

-n, --include_null

include fields with null values

Default: False