Fields that can be included with the -f
option
Name |
Meaning |
---|---|
release_version |
Release version of the allele |
allele_description_ref |
Unique reference to the allele description, in standardized form (Repo:Label:Version) |
aliases |
Alternative names for this sequence |
locus |
Gene Locus (e.g. IGH) |
chromosome |
Chromosome (e.g. 14) |
sequence_type |
Sequence type (e.g. V) |
functional |
Functional (T/F) |
species |
Binomial designation of subject’s species |
species_subgroup |
Race, strain or other species subgroup to which this subject belongs |
species_subgroup_type |
Identifier of the gene subgroup or clade, as (and if) defined |
gene_designation |
Gene number or other identifier, as (and if) defined |
allele_designation |
Allele number or other identifier, as (and if) defined |
allele_similarity_cluster_designation |
ID of the similarity cluster used in this germline set, if designated |
allele_similarity_cluster_member_id |
ID of the similarity cluster member used in this germline set, if designated |
paralogs |
Labels of paralogs, if any |
curational_tags |
Tags used to indicate curational status |
gs_release_version |
Release version of the germline set |
gs_germline_set_name |
Name of the germline set |
gs_germline_set_ref |
Unique reference to the germline set, in standardized form (Repo:Label:Version) |